Transcript: lnc-ZNF676-1:6

Basic information

LNCipedia transcript ID: lnc-ZNF676-1:6 
LNCipedia gene ID: lnc-ZNF676-1
Ensembl Gene ID: ENSG00000267872
Ensembl Transcript ID: ENST00000599810
Location (hg19): chr19:22426056-22428149
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2094 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT063771; ENST00000599810.1
Alternative gene names: ENSG00000267872.1; RP11-157B13.7; AC073539.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.5994 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF676-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF676-1:6
4.0 lnc-ZNF676-1:6
4.1 lnc-ZNF676-1:6
5.0 lnc-ZNF676-1:6
5.1 lnc-PALM3-212:5
5.2 lnc-ZNF676-1:6