Transcript: lnc-ZNF705D-2:23

Basic information

LNCipedia transcript ID: lnc-ZNF705D-2:23 
LNCipedia gene ID: lnc-ZNF705D-2
Location (hg19): chr8:11973291-12424354
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1914 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT125115
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 134.8868 coding 
CPAT coding probability 67.10% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF705D-2:23 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF705D-2:6
4.0 lnc-AC130352.1-2:5
4.1 lnc-AC130352.1-2:5
5.0 lnc-AC130352.1-2:5
5.1 lnc-DEFB106A-82:4
5.2 lnc-ZNF705D-2:23