Transcript: lnc-ZNF720-1:5

Basic information

LNCipedia transcript ID: lnc-ZNF720-1:5 
LNCipedia gene ID: lnc-ZNF720-1
Location (hg19): chr16:31716991-31718672
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000431761; NONHSAT141957
Alternative gene names: ENSG00000131797; KIAA0664L3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 152.9135 coding 
CPAT coding probability 24.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZNF720-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF720-1:5
3.1 lnc-ZNF720-1:5
4.0 lnc-ZNF720-1:5
4.1 lnc-ZNF720-1:5
5.0 lnc-ZNF720-1:5
5.1 lnc-ZNF646-66:9
5.2 lnc-ZNF720-1:5