Transcript: lnc-ZNF778-2:3

Basic information

LNCipedia transcript ID: lnc-ZNF778-2:3 
LNCipedia gene ID: lnc-ZNF778-2
Location (hg19): chr16:89386860-89389669
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 939 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261253.1|FTMT26300000586.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.0567 non-coding 
CPAT coding probability 3.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF778-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC009113.1-2:4
5.0 lnc-AC009113.1-2:4
5.1 lnc-SPG7-11:1
5.2 lnc-ZNF778-2:3