Transcript: lnc-ZNF791-2:1

Basic information

LNCipedia transcript ID: lnc-ZNF791-2:1 
LNCipedia gene ID: lnc-ZNF791-2
Ensembl Gene ID: ENSG00000234848
Ensembl Transcript ID: ENST00000420038
Location (hg19): chr19:12561749-12571519
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 695 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00026825; ENST00000420038.1; CTD-3105H18.7-001; OTTHUMT00000344130.1; NONHSAT061248
Alternative gene names: XLOC_012971; linc-ZNF791-2; ENSG00000234848.1; CTD-3105H18.7; OTTHUMG00000156423.1; AC008758.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.9701 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF791-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF791-2:1
3.1 lnc-ZNF791-2:1
4.0 lnc-ZNF791-2:1
4.1 lnc-ZNF791-2:1
5.0 lnc-ZNF791-2:1
5.1 lnc-ZNF763-5:1
5.2 lnc-ZNF791-2:1