Transcript: lnc-ZNFX1-2:1

Basic information

LNCipedia transcript ID: lnc-ZNFX1-2:1 
LNCipedia gene ID: lnc-ZNFX1-2
Location (hg19): chr20:47740922-47804857
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 882 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT080198
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.1365 non-coding 
CPAT coding probability 19.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNFX1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNFX1-2:1
4.0 lnc-ZNFX1-2:1
4.1 lnc-ZNFX1-2:1
5.0 lnc-ZNFX1-2:1
5.1 lnc-SPATA2-26:1
5.2 lnc-ZNFX1-2:1