Transcript: lnc-ZNFX1-3:2

Basic information

LNCipedia transcript ID: lnc-ZNFX1-3:2 
LNCipedia gene ID: lnc-ZNFX1-3
Location (hg19): chr20:47980414-47984296
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3883 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT080219
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.7847 non-coding 
CPAT coding probability 7.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNFX1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNB1-1:2
4.0 lnc-KCNB1-1:2
4.1 lnc-KCNB1-1:2
5.0 lnc-KCNB1-1:2
5.1 lnc-SPATA2-18:2
5.2 lnc-ZNFX1-3:2