Transcript: lnc-ZSWIM2-16:4

Basic information

LNCipedia transcript ID: lnc-ZSWIM2-16:4 
LNCipedia gene ID: lnc-ZSWIM2-16
Location (hg19): chr2:187442518-187454623
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1068 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000050905.1|HBMT00000821614.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.2614 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSWIM2-16:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZSWIM2-16:4
5.0 lnc-ZSWIM2-16:4
5.1 lnc-CALCRL-16:4
5.2 lnc-ZSWIM2-16:4