Transcript: lnc-ZSWIM2-7:4

Basic information

LNCipedia transcript ID: lnc-ZSWIM2-7:4 
LNCipedia gene ID: lnc-ZSWIM2-7
RefSeq ID: NR_136319
Location (hg19): chr2:186029681-186031799
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 615 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136319.1
Alternative gene names: LOC105373782


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.0564 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSWIM2-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CALCRL-20:4
5.1 lnc-CALCRL-20:4
5.2 lnc-ZSWIM2-7:4