Transcript: lnc-ZSWIM6-1:1

Basic information

LNCipedia transcript ID: lnc-ZSWIM6-1:1 
LNCipedia gene ID: lnc-ZSWIM6-1
Location (hg19): chr5:60860517-60864290
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 243 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT101674; FPKM1_group_25446_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -456.0916 non-coding 
CPAT coding probability 12.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSWIM6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZSWIM6-1:1
4.0 lnc-ZSWIM6-1:1
4.1 lnc-ZSWIM6-1:1
5.0 lnc-ZSWIM6-1:1
5.1 lnc-GAPT-31:1
5.2 lnc-ZSWIM6-1:1