Gene: FTX

Basic information

LNCipedia gene ID: FTX 
Location (hg19): chrX:73166390-73513409
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 57

Transcripts

Transcript IDLocation (hg19)Length
FTX:1 chrX:73247971-73513409 1639 bp
FTX:10 chrX:73494177-73512430 574 bp
FTX:11 chrX:73494191-73512364 561 bp
FTX:12 chrX:73500236-73512186 579 bp
FTX:13 chrX:73183790-73512177 1077 bp
FTX:14 chrX:73500296-73511910 654 bp
FTX:15 chrX:73501540-73504697 264 bp
FTX:16 chrX:73462445-73462736 292 bp
FTX:17 chrX:73420064-73461983 3897 bp
FTX:18 chrX:73416185-73444924 28740 bp
FTX:19 chrX:73429811-73433495 3685 bp
FTX:2 chrX:73247971-73513409 2356 bp
FTX:20 chrX:73384424-73430087 708 bp
FTX:21 chrX:73414934-73429160 2597 bp
FTX:22 chrX:73416961-73428911 579 bp
FTX:23 chrX:73417021-73428635 654 bp
FTX:24 chrX:73425037-73428011 2975 bp
FTX:25 chrX:73418265-73421422 264 bp
FTX:26 chrX:73247971-73513365 2312 bp
FTX:27 chrX:73289193-73513365 809 bp
FTX:28 chrX:73435397-73513365 47120 bp
FTX:29 chrX:73435397-73513365 9798 bp
FTX:3 chrX:73436901-73513386 37513 bp
FTX:30 chrX:73435397-73513365 59239 bp
FTX:31 chrX:73467699-73513365 711 bp
FTX:32 chrX:73491150-73513365 9661 bp
FTX:33 chrX:73500766-73513365 687 bp
FTX:34 chrX:73428874-73512418 10346 bp
FTX:35 chrX:73435397-73512418 65392 bp
FTX:36 chrX:73435397-73512418 61239 bp
FTX:37 chrX:73491150-73512418 9639 bp
FTX:38 chrX:73494177-73512418 562 bp
FTX:39 chrX:73498209-73512418 2580 bp
FTX:4 chrX:73421504-73513377 7047 bp
FTX:40 chrX:73435397-73512364 65596 bp
FTX:41 chrX:73494191-73512364 561 bp
FTX:42 chrX:73183790-73512186 1086 bp
FTX:43 chrX:73435397-73512186 59435 bp
FTX:44 chrX:73495976-73512186 5250 bp
FTX:45 chrX:73500236-73512186 579 bp
FTX:46 chrX:73510240-73511899 333 bp
FTX:47 chrX:73428874-73511899 10496 bp
FTX:48 chrX:73428874-73511899 10479 bp
FTX:49 chrX:73500296-73511899 643 bp
FTX:5 chrX:73500766-73513374 696 bp
FTX:50 chrX:73416186-73513409 8347 bp
FTX:51 chrX:73350144-73512429 1367 bp
FTX:52 chrX:73218077-73512418 9771 bp
FTX:53 chrX:73201731-73232780 11246 bp
FTX:54 chrX:73166390-73232780 12267 bp
FTX:55 chrX:73218077-73232780 11469 bp
FTX:58 chrX:73229224-73231303 905 bp
FTX:59 chrX:73167080-73225243 1269 bp
FTX:6 chrX:73467699-73513362 708 bp
FTX:7 chrX:73289193-73513307 751 bp
FTX:8 chrX:73511528-73512456 217 bp
FTX:9 chrX:73498209-73512435 2597 bp


Locus conservation

Locus conservation?
FTX no no no no

Available literature

  1. Caudron-Herger (2015), Dissecting the nascent human transcriptome by analysing the RNA content of transcription factories., Nucleic Acids Res.
  2. Guo (2015), Biological significance of long non-coding RNA FTX expression in human colorectal cancer., Int J Clin Exp Med
  3. Reiche (2014), Long non-coding RNAs differentially expressed between normal versus primary breast tumor tissues disclose converse changes to breast cancer-related protein-coding genes., PLoS ONE
  4. Soma (2014), Ftx is dispensable for imprinted X-chromosome inactivation in preimplantation mouse embryos., Sci Rep
  5. Yoon (2014), PAR-CLIP analysis uncovers AUF1 impact on target RNA fate and genome integrity., Nat Commun
  6. Zhao (2014), The miR-545/374a cluster encoded in the Ftx lncRNA is overexpressed in HBV-related hepatocellular carcinoma and promotes tumorigenesis and tumor progression., PLoS ONE
  7. Chureau (2011), Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region., Hum. Mol. Genet.
  8. Payer (2011), X-inactivation and X-reactivation: epigenetic hallmarks of mammalian reproduction and pluripotent stem cells., Hum. Genet.
  9. Kolesnikov (2010), [Comparative organization and the origin of noncoding regulatory RNA genes from X-chromosome inactivation center of human and mouse]., Genetika
  10. Chureau (2002), Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine., Genome Res.