Gene: FTX
Basic information
LNCipedia gene ID: FTX
Location (hg19): chrX:73166390-73513409
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 57
Transcripts
Transcript ID | Location (hg19) | Length |
---|---|---|
FTX:1 | chrX:73247971-73513409 | 1639 bp |
FTX:10 | chrX:73494177-73512430 | 574 bp |
FTX:11 | chrX:73494191-73512364 | 561 bp |
FTX:12 | chrX:73500236-73512186 | 579 bp |
FTX:13 | chrX:73183790-73512177 | 1077 bp |
FTX:14 | chrX:73500296-73511910 | 654 bp |
FTX:15 | chrX:73501540-73504697 | 264 bp |
FTX:16 | chrX:73462445-73462736 | 292 bp |
FTX:17 | chrX:73420064-73461983 | 3897 bp |
FTX:18 | chrX:73416185-73444924 | 28740 bp |
FTX:19 | chrX:73429811-73433495 | 3685 bp |
FTX:2 | chrX:73247971-73513409 | 2356 bp |
FTX:20 | chrX:73384424-73430087 | 708 bp |
FTX:21 | chrX:73414934-73429160 | 2597 bp |
FTX:22 | chrX:73416961-73428911 | 579 bp |
FTX:23 | chrX:73417021-73428635 | 654 bp |
FTX:24 | chrX:73425037-73428011 | 2975 bp |
FTX:25 | chrX:73418265-73421422 | 264 bp |
FTX:26 | chrX:73247971-73513365 | 2312 bp |
FTX:27 | chrX:73289193-73513365 | 809 bp |
FTX:28 | chrX:73435397-73513365 | 47120 bp |
FTX:29 | chrX:73435397-73513365 | 9798 bp |
FTX:3 | chrX:73436901-73513386 | 37513 bp |
FTX:30 | chrX:73435397-73513365 | 59239 bp |
FTX:31 | chrX:73467699-73513365 | 711 bp |
FTX:32 | chrX:73491150-73513365 | 9661 bp |
FTX:33 | chrX:73500766-73513365 | 687 bp |
FTX:34 | chrX:73428874-73512418 | 10346 bp |
FTX:35 | chrX:73435397-73512418 | 65392 bp |
FTX:36 | chrX:73435397-73512418 | 61239 bp |
FTX:37 | chrX:73491150-73512418 | 9639 bp |
FTX:38 | chrX:73494177-73512418 | 562 bp |
FTX:39 | chrX:73498209-73512418 | 2580 bp |
FTX:4 | chrX:73421504-73513377 | 7047 bp |
FTX:40 | chrX:73435397-73512364 | 65596 bp |
FTX:41 | chrX:73494191-73512364 | 561 bp |
FTX:42 | chrX:73183790-73512186 | 1086 bp |
FTX:43 | chrX:73435397-73512186 | 59435 bp |
FTX:44 | chrX:73495976-73512186 | 5250 bp |
FTX:45 | chrX:73500236-73512186 | 579 bp |
FTX:46 | chrX:73510240-73511899 | 333 bp |
FTX:47 | chrX:73428874-73511899 | 10496 bp |
FTX:48 | chrX:73428874-73511899 | 10479 bp |
FTX:49 | chrX:73500296-73511899 | 643 bp |
FTX:5 | chrX:73500766-73513374 | 696 bp |
FTX:50 | chrX:73416186-73513409 | 8347 bp |
FTX:51 | chrX:73350144-73512429 | 1367 bp |
FTX:52 | chrX:73218077-73512418 | 9771 bp |
FTX:53 | chrX:73201731-73232780 | 11246 bp |
FTX:54 | chrX:73166390-73232780 | 12267 bp |
FTX:55 | chrX:73218077-73232780 | 11469 bp |
FTX:58 | chrX:73229224-73231303 | 905 bp |
FTX:59 | chrX:73167080-73225243 | 1269 bp |
FTX:6 | chrX:73467699-73513362 | 708 bp |
FTX:7 | chrX:73289193-73513307 | 751 bp |
FTX:8 | chrX:73511528-73512456 | 217 bp |
FTX:9 | chrX:73498209-73512435 | 2597 bp |
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
FTX | no | no | no | no |
Available literature
- Caudron-Herger (2015), Dissecting the nascent human transcriptome by analysing the RNA content of transcription factories., Nucleic Acids Res.
- Guo (2015), Biological significance of long non-coding RNA FTX expression in human colorectal cancer., Int J Clin Exp Med
- Reiche (2014), Long non-coding RNAs differentially expressed between normal versus primary breast tumor tissues disclose converse changes to breast cancer-related protein-coding genes., PLoS ONE
- Soma (2014), Ftx is dispensable for imprinted X-chromosome inactivation in preimplantation mouse embryos., Sci Rep
- Yoon (2014), PAR-CLIP analysis uncovers AUF1 impact on target RNA fate and genome integrity., Nat Commun
- Zhao (2014), The miR-545/374a cluster encoded in the Ftx lncRNA is overexpressed in HBV-related hepatocellular carcinoma and promotes tumorigenesis and tumor progression., PLoS ONE
- Chureau (2011), Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region., Hum. Mol. Genet.
- Payer (2011), X-inactivation and X-reactivation: epigenetic hallmarks of mammalian reproduction and pluripotent stem cells., Hum. Genet.
- Kolesnikov (2010), [Comparative organization and the origin of noncoding regulatory RNA genes from X-chromosome inactivation center of human and mouse]., Genetika
- Chureau (2002), Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine., Genome Res.