Gene: LINC00472
Basic information
LNCipedia gene ID: LINC00472
Location (hg19): chr6:71897277-72187193
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 70
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| LINC00472:1 | chr6:72128395-72130522 | 817 bp |
| LINC00472:10 | chr6:72083205-72129972 | 12222 bp |
| LINC00472:11 | chr6:72126087-72129970 | 451 bp |
| LINC00472:12 | chr6:72126180-72129970 | 475 bp |
| LINC00472:13 | chr6:72054289-72129969 | 667 bp |
| LINC00472:14 | chr6:72125866-72129964 | 717 bp |
| LINC00472:15 | chr6:72054047-72129806 | 662 bp |
| LINC00472:16 | chr6:72125753-72127161 | 649 bp |
| LINC00472:17 | chr6:72004876-72127139 | 732 bp |
| LINC00472:18 | chr6:72117911-72127033 | 2207 bp |
| LINC00472:19 | chr6:72082956-72085090 | 2125 bp |
| LINC00472:2 | chr6:72123954-72130506 | 3171 bp |
| LINC00472:20 | chr6:72082947-72084695 | 1749 bp |
| LINC00472:21 | chr6:72053204-72055909 | 1226 bp |
| LINC00472:22 | chr6:72017829-72037931 | 808 bp |
| LINC00472:23 | chr6:72012443-72037921 | 718 bp |
| LINC00472:24 | chr6:72017558-72037921 | 749 bp |
| LINC00472:25 | chr6:72017705-72037920 | 946 bp |
| LINC00472:26 | chr6:72020016-72037814 | 288 bp |
| LINC00472:27 | chr6:72012545-72037787 | 525 bp |
| LINC00472:28 | chr6:72017644-72037787 | 529 bp |
| LINC00472:29 | chr6:71961265-72037766 | 704 bp |
| LINC00472:3 | chr6:72124149-72130472 | 2957 bp |
| LINC00472:30 | chr6:71963387-72037766 | 798 bp |
| LINC00472:31 | chr6:71986922-72037766 | 750 bp |
| LINC00472:32 | chr6:71991088-72037766 | 766 bp |
| LINC00472:33 | chr6:72004879-72037766 | 651 bp |
| LINC00472:34 | chr6:72012669-72037766 | 750 bp |
| LINC00472:35 | chr6:72012673-72037766 | 469 bp |
| LINC00472:36 | chr6:72017644-72037766 | 680 bp |
| LINC00472:37 | chr6:72019999-72037766 | 656 bp |
| LINC00472:38 | chr6:72005248-72037766 | 645 bp |
| LINC00472:39 | chr6:72012681-72037762 | 655 bp |
| LINC00472:4 | chr6:72124148-72130472 | 2958 bp |
| LINC00472:40 | chr6:72017648-72037761 | 578 bp |
| LINC00472:41 | chr6:72013600-72037760 | 745 bp |
| LINC00472:42 | chr6:72017684-72037756 | 634 bp |
| LINC00472:43 | chr6:72017729-72021351 | 605 bp |
| LINC00472:44 | chr6:72004876-72020298 | 418 bp |
| LINC00472:45 | chr6:71961061-72020279 | 465 bp |
| LINC00472:46 | chr6:71961067-72020043 | 407 bp |
| LINC00472:47 | chr6:71931160-71994635 | 488 bp |
| LINC00472:48 | chr6:71939529-71948301 | 393 bp |
| LINC00472:49 | chr6:71897277-71943366 | 228 bp |
| LINC00472:5 | chr6:72124149-72130448 | 2933 bp |
| LINC00472:50 | chr6:72180870-72187193 | 2957 bp |
| LINC00472:51 | chr6:72180870-72187169 | 2933 bp |
| LINC00472:52 | chr6:72182808-72186691 | 451 bp |
| LINC00472:53 | chr6:72182901-72186691 | 475 bp |
| LINC00472:54 | chr6:72111010-72186690 | 667 bp |
| LINC00472:55 | chr6:72110768-72186527 | 662 bp |
| LINC00472:56 | chr6:72092054-72130532 | 35028 bp |
| LINC00472:57 | chr6:72092054-72130532 | 2703 bp |
| LINC00472:58 | chr6:72124148-72130532 | 3018 bp |
| LINC00472:59 | chr6:72082783-72129868 | 343 bp |
| LINC00472:6 | chr6:72117567-72130448 | 9515 bp |
| LINC00472:60 | chr6:72126087-72129868 | 349 bp |
| LINC00472:61 | chr6:72126180-72129868 | 373 bp |
| LINC00472:62 | chr6:72116737-72129868 | 9626 bp |
| LINC00472:63 | chr6:72054047-72129868 | 724 bp |
| LINC00472:64 | chr6:72054289-72129868 | 566 bp |
| LINC00472:65 | chr6:72092832-72129868 | 1261 bp |
| LINC00472:66 | chr6:72111180-72129868 | 15256 bp |
| LINC00472:67 | chr6:72117621-72129868 | 8881 bp |
| LINC00472:68 | chr6:72125866-72129868 | 621 bp |
| LINC00472:69 | chr6:72112956-72125712 | 12646 bp |
| LINC00472:7 | chr6:72117567-72130448 | 9566 bp |
| LINC00472:70 | chr6:71959607-71998425 | 2138 bp |
| LINC00472:8 | chr6:72117567-72130448 | 9500 bp |
| LINC00472:9 | chr6:72117567-72130448 | 9449 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| LINC00472 | no | no | no | no |
Available literature
- Permuth (2017), Linc-ing Circulating Long Non-coding RNAs to the Diagnosis and Malignant Prediction of Intraductal Papillary Mucinous Neoplasms of the Pancreas., Sci Rep
- Fu (2016), Long non-coding RNAs, ASAP1-IT1, FAM215A, and LINC00472, in epithelial ovarian cancer., Gynecol. Oncol.
- Dhir (2015), Microprocessor mediates transcriptional termination of long noncoding RNA transcripts hosting microRNAs., Nat. Struct. Mol. Biol.
- Shen (2015), Prognostic and predictive values of long non-coding RNA LINC00472 in breast cancer., Oncotarget