Gene: SNHG4

Basic information

LNCipedia gene ID: SNHG4 
Location (hg19): chr5:138609441-138619166
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA_gene
Transcripts: 12

Transcripts

Transcript IDLocation (hg19)Length
SNHG4:1 chr5:138609441-138615317 1100 bp
SNHG4:10 chr5:138609820-138618834 629 bp
SNHG4:11 chr5:138609821-138615278 678 bp
SNHG4:2 chr5:138609441-138618873 1047 bp
SNHG4:20 chr5:138609820-138619166 961 bp
SNHG4:3 chr5:138609791-138615528 542 bp
SNHG4:4 chr5:138609792-138618678 801 bp
SNHG4:5 chr5:138609792-138615077 575 bp
SNHG4:6 chr5:138609793-138615748 444 bp
SNHG4:7 chr5:138609807-138618933 865 bp
SNHG4:8 chr5:138609820-138614818 310 bp
SNHG4:9 chr5:138609820-138615275 679 bp


Locus conservation

Locus conservation?
SNHG4 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res
  2. Kraus (2015), Identification of Stably Expressed lncRNAs as Valid Endogenous Controls for Profiling of Human Glioma., J Cancer
  3. Shen (2015), Exploration of Deregulated Long Non-Coding RNAs in Association with Hepatocarcinogenesis and Survival., Cancers (Basel)
  4. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE
  5. Takahashi (2014), Extracellular vesicle-mediated transfer of long non-coding RNA ROR modulates chemosensitivity in human hepatocellular cancer., FEBS Open Bio
  6. Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome Res.
  7. Friedel (2009), Conserved principles of mammalian transcriptional regulation revealed by RNA half-life., Nucleic Acids Res.
  8. Bortolin (1998), Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein coding., RNA