Transcript: ENTPD3-AS1:11

Basic information

LNCipedia transcript ID: ENTPD3-AS1:11 
LNCipedia gene ID: ENTPD3-AS1
Location (hg19): chr3:40486721-40486924
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 204 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT089158; FPKM1_group_21112_transcript_1
Alternative gene names: FLJ36665


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ENTPD3-AS1:11 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ULK4-7:10
4.0 ENTPD3-AS1:11
4.1 ENTPD3-AS1:11
5.0 ENTPD3-AS1:11
5.1 ENTPD3-AS1:11
5.2 ENTPD3-AS1:11