Transcript: ENTPD3-AS1:17

Basic information

LNCipedia transcript ID: ENTPD3-AS1:17 
LNCipedia gene ID: ENTPD3-AS1
Location (hg19): chr3:40432442-40494800
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2040 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223797.1|ENST00000425156.1
Alternative gene names: FLJ36665


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 65.9615 coding 
CPAT coding probability 5.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ENTPD3-AS1:17 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ENTPD3-AS1:17
5.0 ENTPD3-AS1:17
5.1 ENTPD3-AS1:17
5.2 ENTPD3-AS1:17