Transcript: ENTPD3-AS1:8

Basic information

LNCipedia transcript ID: ENTPD3-AS1:8 
HGNC Gene Symbol: ENTPD3-AS1    
HGNC Full Gene Name: ENTPD3 antisense RNA 1
Ensembl Gene ID: ENSG00000223797
Ensembl Transcript ID: ENST00000439293
Location (hg19): chr3:40355293-40494677
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 539 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000439293; ENST00000439293.1; ENTPD3-AS1-002; OTTHUMT00000342936.1; NONHSAT089153; ENST00000439293.5
Alternative gene names: ENSG00000223797; ENTPD3-AS1; ENSG00000223797.1; OTTHUMG00000156074.2; ENSG00000223797.5; FLJ36665


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.3643 non-coding 
CPAT coding probability 2.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ENTPD3-AS1:8 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ULK4-7:3
3.1 lnc-ULK4-7:3
4.0 ENTPD3-AS1:8
4.1 ENTPD3-AS1:8
5.0 ENTPD3-AS1:8
5.1 ENTPD3-AS1:8
5.2 ENTPD3-AS1:8