Transcript: LINC01471:1

Basic information

LNCipedia transcript ID: LINC01471:1 
LNCipedia gene ID: LINC01471
Location (hg19): chr3:127217322-127257825
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3983 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006648; NONHSAT091727
Alternative gene names: XLOC_003240; linc-TXNRD3-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.9987 non-coding 
CPAT coding probability 26.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01471:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPRA1-1:1
3.1 lnc-TPRA1-1:1
4.0 LINC01471:1
4.1 LINC01471:1
5.0 LINC01471:1
5.1 LINC01471:1
5.2 LINC01471:1