Transcript: LINC01471:2

Basic information

LNCipedia transcript ID: LINC01471:2 
LNCipedia gene ID: LINC01471
Location (hg19): chr3:127247211-127257825
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4796 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006650; NONHSAT091729
Alternative gene names: XLOC_003240; linc-TXNRD3-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.0595 non-coding 
CPAT coding probability 26.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01471:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPRA1-1:2
3.1 lnc-TPRA1-1:2
4.0 LINC01471:2
4.1 LINC01471:2
5.0 LINC01471:2
5.1 LINC01471:2
5.2 LINC01471:2