Transcript: LINC01714:28

Basic information

LNCipedia transcript ID: LINC01714:28 
LNCipedia gene ID: LINC01714
Location (hg19): chr1:8137472-8182065
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 677 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000734
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -243.1304 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01714:28 no no no no

Available literature

  1. Malouf (2015), Characterization of long non-coding RNA transcriptome in clear-cell renal cell carcinoma by next-generation deep sequencing., Mol Oncol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARK7-1:4
4.0 lnc-PARK7-1:4
4.1 lnc-PARK7-1:4
5.0 lnc-PARK7-1:4
5.1 LINC01714:10
5.2 LINC01714:28