Transcript: NR2F2-AS1:56

Basic information

LNCipedia transcript ID: NR2F2-AS1:56 
LNCipedia gene ID: NR2F2-AS1
Ensembl Gene ID: ENSG00000273771
Ensembl Transcript ID: ENST00000616608
Location (hg19): chr15:96623942-96627813
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2797 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616608.1
Alternative gene names: ENSG00000273771.1; RP11-236L14.2; ; AC024337.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.8193 non-coding 
CPAT coding probability 1.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NR2F2-AS1:56 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC016251.1-27:1
4.1 NR2F2-AS1:56
5.0 NR2F2-AS1:56
5.1 NR2F2-AS1:56
5.2 NR2F2-AS1:56