Transcript: NUTM2A-AS1:23

Basic information

LNCipedia transcript ID: NUTM2A-AS1:23 
LNCipedia gene ID: NUTM2A-AS1
Location (hg19): chr10:88967961-89005971
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 406 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT015404
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.0876 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NUTM2A-AS1:23 no no no no

Available literature

  1. Joo (2014), Role of Pnn in alternative splicing of a specific subset of lncRNAs of the corneal epithelium., Mol. Vis.
  2. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLUD1-4:20
4.0 NUTM2A-AS1:23
4.1 NUTM2A-AS1:23
5.0 NUTM2A-AS1:23
5.1 NUTM2A-AS1:23
5.2 NUTM2A-AS1:23