Transcript: NUTM2B-AS1:28

Basic information

LNCipedia transcript ID: NUTM2B-AS1:28 
HGNC Gene Symbol: NUTM2B-AS1    
HGNC Full Gene Name: NUTM2B antisense RNA 1
Ensembl Gene ID: ENSG00000225484
Ensembl Transcript ID: ENST00000430963
Location (hg19): chr10:81563813-81565878
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430963; ENST00000430963.1; RP11-773D16.1-008; OTTHUMT00000049005.1; ENST00000430963.5
Alternative gene names: ENSG00000225484; RP11-773D16.1; ENSG00000225484.2; OTTHUMG00000018585.1; ENSG00000225484.6; NUTM2B-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.1483 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NUTM2B-AS1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SFTPD-2:9
3.1 lnc-SFTPD-2:9
4.0 NUTM2B-AS1:28
4.1 NUTM2B-AS1:28
5.0 NUTM2B-AS1:28
5.1 NUTM2B-AS1:28
5.2 NUTM2B-AS1:28