Transcript: NUTM2B-AS1:30

Basic information

LNCipedia transcript ID: NUTM2B-AS1:30 
LNCipedia gene ID: NUTM2B-AS1
Location (hg19): chr10:81524486-81546199
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2221 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000445306; ENST00000445306.1; RP11-119F19.2-001; OTTHUMT00000048976.1
Alternative gene names: ENSG00000226381; RP11-119F19.2; ENSG00000226381.1; OTTHUMG00000018573.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.1433 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NUTM2B-AS1:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SFTPD-3:1
3.1 lnc-SFTPD-3:1
4.0 NUTM2B-AS1:30
4.1 NUTM2B-AS1:30
5.0 NUTM2B-AS1:30
5.1 NUTM2B-AS1:30
5.2 NUTM2B-AS1:30