Transcript: PRKAR2A-AS1:7

Basic information

LNCipedia transcript ID: PRKAR2A-AS1:7 
LNCipedia gene ID: PRKAR2A-AS1
RefSeq ID: NR_109997
Location (hg19): chr3:48885370-48889415
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3389 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109997; NR_109997.1
Alternative gene names: ; PRKAR2A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.156 non-coding 
CPAT coding probability 13.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRKAR2A-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARIH2-1:11
4.0 PRKAR2A-AS1:7
4.1 PRKAR2A-AS1:7
5.0 PRKAR2A-AS1:7
5.1 PRKAR2A-AS1:7
5.2 PRKAR2A-AS1:7