Transcript: PRKAR2A-AS1:9

Basic information

LNCipedia transcript ID: PRKAR2A-AS1:9 
LNCipedia gene ID: PRKAR2A-AS1
Location (hg19): chr3:48885390-48889414
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3446 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000523129.2; PRKAR2A-AS1-201
Alternative gene names: ENSG00000224424.6; PRKAR2A-AS1; OTTHUMG00000156671.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.7808 non-coding 
CPAT coding probability 20.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PRKAR2A-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARIH2-1:4
4.0 PRKAR2A-AS1:9
4.1 PRKAR2A-AS1:9
5.0 PRKAR2A-AS1:9
5.1 PRKAR2A-AS1:9
5.2 PRKAR2A-AS1:9