Transcript: SATB1-AS1:63

Basic information

LNCipedia transcript ID: SATB1-AS1:63 
LNCipedia gene ID: SATB1-AS1
Location (hg19): chr3:18567611-18572727
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1944 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT088584; FPKM1_group_20902_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.8214 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SATB1-AS1:63 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNH8-1:24
4.0 SATB1-AS1:63
4.1 SATB1-AS1:63
5.0 SATB1-AS1:63
5.1 SATB1-AS1:63
5.2 SATB1-AS1:63