Transcript: SATB1-AS1:86

Basic information

LNCipedia transcript ID: SATB1-AS1:86 
LNCipedia gene ID: SATB1-AS1
Location (hg19): chr3:18626906-18628395
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 208 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT088588; FPKM1_group_20905_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 5.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SATB1-AS1:86 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNH8-1:28
4.0 SATB1-AS1:86
4.1 SATB1-AS1:86
5.0 SATB1-AS1:86
5.1 SATB1-AS1:86
5.2 SATB1-AS1:86