Transcript: SEC23A-AS1:13

Basic information

LNCipedia transcript ID: SEC23A-AS1:13 
LNCipedia gene ID: SEC23A-AS1
Location (hg19): chr14:39572496-39575957
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3462 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258651.1|HBMT00000427796.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.7035 non-coding 
CPAT coding probability 5.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SEC23A-AS1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GEMIN2-1:4
5.0 lnc-GEMIN2-1:4
5.1 SEC23A-AS1:5
5.2 SEC23A-AS1:13