Transcript: SEC23A-AS1:17

Basic information

LNCipedia transcript ID: SEC23A-AS1:17 
LNCipedia gene ID: SEC23A-AS1
Location (hg19): chr14:39577546-39577911
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 366 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT036512
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.4106 non-coding 
CPAT coding probability 17.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SEC23A-AS1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GEMIN2-3:1
4.0 lnc-GEMIN2-3:1
4.1 lnc-GEMIN2-1:8
5.0 lnc-GEMIN2-1:8
5.1 SEC23A-AS1:9
5.2 SEC23A-AS1:17