Transcript: TEX41:116

Basic information

LNCipedia transcript ID: TEX41:116 
LNCipedia gene ID: TEX41
Location (hg19): chr2:145425552-145834296
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4635 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226674.4|ENST00000445791.1
Alternative gene names: DKFZp686O1327; LINC00953


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -86.1348 non-coding 
CPAT coding probability 4.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX41:116 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TEX41:116
5.0 TEX41:116
5.1 TEX41:116
5.2 TEX41:116