Transcript: TEX41:3

Basic information

LNCipedia transcript ID: TEX41:3 
LNCipedia gene ID: TEX41
Location (hg19): chr2:145425534-145834291
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4786 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT074787; NR_033870
Alternative gene names: DKFZp686O1327; LINC00953


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.1348 non-coding 
CPAT coding probability 4.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX41:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP15-6:12
4.0 TEX41:3
4.1 TEX41:3
5.0 TEX41:3
5.1 TEX41:3
5.2 TEX41:3