Transcript: THUMPD3-AS1:54

Basic information

LNCipedia transcript ID: THUMPD3-AS1:54 
LNCipedia gene ID: THUMPD3-AS1
Location (hg19): chr3:9427479-9439123
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 804 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000206573.4|ENST00000521609.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.1099 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THUMPD3-AS1:54 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 THUMPD3-AS1:54
5.0 THUMPD3-AS1:54
5.1 THUMPD3-AS1:54
5.2 THUMPD3-AS1:54