Transcript: THUMPD3-AS1:85

Basic information

LNCipedia transcript ID: THUMPD3-AS1:85 
LNCipedia gene ID: THUMPD3-AS1
Location (hg19): chr3:9358197-9404706
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 9967 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254485.1|ENCT00000300055.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 45.138 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
THUMPD3-AS1:85 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 THUMPD3-AS1:85
5.0 THUMPD3-AS1:85
5.1 THUMPD3-AS1:85
5.2 THUMPD3-AS1:85