Transcript: TOLLIP-AS1:2

Basic information

LNCipedia transcript ID: TOLLIP-AS1:2 
LNCipedia gene ID: TOLLIP-AS1
Location (hg19): chr11:1330994-1332147
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1154 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT017400
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 122.7911 coding 
CPAT coding probability 14.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TOLLIP-AS1:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MUC5B-2:3
4.0 TOLLIP-AS1:2
4.1 TOLLIP-AS1:2
5.0 TOLLIP-AS1:2
5.1 TOLLIP-AS1:2
5.2 TOLLIP-AS1:2