Transcript: ZNF582-AS1:11

Basic information

LNCipedia transcript ID: ZNF582-AS1:11 
LNCipedia gene ID: ZNF582-AS1
Location (hg19): chr19:56905050-56910523
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1017 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027121; NONHSAT068136
Alternative gene names: XLOC_013167; linc-ZNF583-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.3767 non-coding 
CPAT coding probability 20.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF582-AS1:11 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF583-1:4
3.1 lnc-ZNF583-1:4
4.0 ZNF582-AS1:11
4.1 ZNF582-AS1:11
5.0 ZNF582-AS1:11
5.1 ZNF582-AS1:11
5.2 ZNF582-AS1:11