Transcript: ZNF582-AS1:13

Basic information

LNCipedia transcript ID: ZNF582-AS1:13 
LNCipedia gene ID: ZNF582-AS1
Location (hg19): chr19:56905076-56906173
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 920 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027124; NONHSAT068138
Alternative gene names: XLOC_013167; linc-ZNF583-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2668 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF582-AS1:13 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF583-1:6
3.1 lnc-ZNF583-1:6
4.0 ZNF582-AS1:13
4.1 ZNF582-AS1:13
5.0 ZNF582-AS1:13
5.1 ZNF582-AS1:13
5.2 ZNF582-AS1:13