Transcript: ZNF582-AS1:9

Basic information

LNCipedia transcript ID: ZNF582-AS1:9 
LNCipedia gene ID: ZNF582-AS1
RefSeq ID: NR_037160
Location (hg19): chr19:56905045-56910544
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1673 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT068134; NR_037160; NR_037160.1
Alternative gene names: ; ZNF582-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.2888 non-coding 
CPAT coding probability 4.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF582-AS1:9 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF583-1:19
4.0 ZNF582-AS1:9
4.1 ZNF582-AS1:9
5.0 ZNF582-AS1:9
5.1 ZNF582-AS1:9
5.2 ZNF582-AS1:9