Transcript: lnc-METTL5-4:102

Basic information

LNCipedia transcript ID: lnc-METTL5-4:102 
LNCipedia gene ID: lnc-METTL5-4
Ensembl Gene ID: ENSG00000231898
Ensembl Transcript ID: ENST00000630683
Location (hg19): chr2:171200097-171207488
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 645 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000630683.2
Alternative gene names: ENSG00000231898.8; AC012594.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -155.3483 non-coding 
CPAT coding probability 4.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL5-4:102 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC007405.2.1-4:45
4.1 lnc-AC007405.2.1-4:45
5.0 lnc-AC007405.2.1-4:45
5.1 lnc-METTL5-4:20
5.2 lnc-METTL5-4:102