Transcript: lnc-METTL5-4:104

Basic information

LNCipedia transcript ID: lnc-METTL5-4:104 
LNCipedia gene ID: lnc-METTL5-4
Location (hg19): chr2:171199982-171207453
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 385 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000424391.1; AC012594.1-002; OTTHUMT00000333425.1
Alternative gene names: ENSG00000231898.2; AC012594.1; OTTHUMG00000154003.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.3483 non-coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL5-4:104 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-4:3
4.0 lnc-AC007405.2.1-4:3
4.1 lnc-AC007405.2.1-4:3
5.0 lnc-AC007405.2.1-4:3
5.1 lnc-METTL5-4:22
5.2 lnc-METTL5-4:104