Transcript: lnc-METTL5-4:106

Basic information

LNCipedia transcript ID: lnc-METTL5-4:106 
LNCipedia gene ID: lnc-METTL5-4
RefSeq ID: NR_110576
Location (hg19): chr2:171197027-171207453
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1311 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110576; NR_110576.1
Alternative gene names: LOC101929753


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.3712 non-coding 
CPAT coding probability 1.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL5-4:106 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-4:37
4.0 lnc-AC007405.2.1-4:37
4.1 lnc-AC007405.2.1-4:37
5.0 lnc-AC007405.2.1-4:37
5.1 lnc-METTL5-4:24
5.2 lnc-METTL5-4:106