Transcript: lnc-METTL5-4:115

Basic information

LNCipedia transcript ID: lnc-METTL5-4:115 
LNCipedia gene ID: lnc-METTL5-4
Ensembl Gene ID: ENSG00000231898
Ensembl Transcript ID: ENST00000608716
Location (hg19): chr2:171197705-171207137
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 857 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608716.1; ENST00000608716.5
Alternative gene names: ENSG00000231898.4; AC012594.1; ENSG00000231898.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.3483 non-coding 
CPAT coding probability 3.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL5-4:115 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-4:18
4.0 lnc-AC007405.2.1-4:18
4.1 lnc-AC007405.2.1-4:18
5.0 lnc-AC007405.2.1-4:18
5.1 lnc-METTL5-4:33
5.2 lnc-METTL5-4:115