Transcript: lnc-MUC20-67:138

Basic information

LNCipedia transcript ID: lnc-MUC20-67:138 
LNCipedia gene ID: lnc-MUC20-67
Location (hg19): chr3:195435262-195436348
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 776 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006380; NONHSAT094218
Alternative gene names: XLOC_002997; linc-MUC20-1; ; ENST00000453324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.1246 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-67:138 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC069257.9.1-2:5
3.1 lnc-AC069257.9.1-4:13
4.0 LINC00969:160
4.1 LINC00969:160
5.0 LINC00969:160
5.1 lnc-MUC20-13:160
5.2 lnc-MUC20-67:138