Transcript: lnc-MUC20-67:139

Basic information

LNCipedia transcript ID: lnc-MUC20-67:139 
LNCipedia gene ID: lnc-MUC20-67
Location (hg19): chr3:195435357-195445881
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 764 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT094220; ENST00000593988.1
Alternative gene names: ENSG00000242086.4; LINC00969; ; ENST00000453324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.9144 non-coding 
CPAT coding probability 21.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-67:139 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:65
4.0 LINC00969:162
4.1 LINC00969:162
5.0 LINC00969:162
5.1 lnc-MUC20-13:162
5.2 lnc-MUC20-67:139