Transcript: lnc-MUC20-67:27

Basic information

LNCipedia transcript ID: lnc-MUC20-67:27 
HGNC Gene Symbol: lnc-MUC20-67    
HGNC Full Gene Name: MUC20 overlapping transcript
Ensembl Gene ID: ENSG00000242086
Ensembl Transcript ID: ENST00000597034
Location (hg19): chr3:195410621-195435139
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 731 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT094184; ENST00000597034.1; ENST00000597034.5
Alternative gene names: ENSG00000242086.4; LINC00969; ENSG00000242086.8; ; ENST00000453324; MUC20-OT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.2434 non-coding 
CPAT coding probability 4.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-67:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:35
4.0 LINC00969:27
4.1 LINC00969:27
5.0 LINC00969:27
5.1 lnc-MUC20-13:27
5.2 lnc-MUC20-67:27