Transcript: lnc-MUC20-67:75

Basic information

LNCipedia transcript ID: lnc-MUC20-67:75 
LNCipedia gene ID: lnc-MUC20-67
Location (hg19): chr3:195427192-195438745
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2362 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000445707.1; AC069513.3-001; OTTHUMT00000341934.1
Alternative gene names: ENSG00000242086.2; AC069513.3; OTTHUMG00000155834.2; ENSG00000242086.4; LINC00969; ; ENST00000453324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 101.2939 coding 
CPAT coding probability 75.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MUC20-67:75 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:6
4.0 LINC00969:75
4.1 LINC00969:75
5.0 LINC00969:75
5.1 lnc-MUC20-13:75
5.2 lnc-MUC20-67:75