Transcript: lnc-MUC20-67:82

Basic information

LNCipedia transcript ID: lnc-MUC20-67:82 
LNCipedia gene ID: lnc-MUC20-67
Location (hg19): chr3:195428510-195449395
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 285 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000432194.2; AC069513.3-003; OTTHUMT00000341936.2
Alternative gene names: ENSG00000242086.2; AC069513.3; OTTHUMG00000155834.2; ; ENST00000453324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.698 non-coding 
CPAT coding probability 28.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-67:82 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:7
4.0 LINC00969:83
4.1 LINC00969:83
5.0 LINC00969:83
5.1 lnc-MUC20-13:83
5.2 lnc-MUC20-67:82