Transcript: lnc-SLC39A11-10:45
Basic information
LNCipedia transcript ID: lnc-SLC39A11-10:45
HGNC Gene Symbol: lnc-SLC39A11-10
HGNC Full Gene Name:
SOX9 antisense RNA 1
Ensembl Gene ID:
ENSG00000234899
Ensembl Transcript ID:
ENST00000540802
Location (hg19): chr17:70030248-70053871
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 578 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000540802; ENST00000540802.1; RP11-84E24.2-002; OTTHUMT00000397676.1; NONHSAT055644
Alternative gene names: ENSG00000254148; RP11-84E24.2; ENSG00000254148.2; OTTHUMG00000168040.1; ENSG00000254148.3; ENSG00000234899.9; SOX9-AS1; FLJ37644
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ![]() |
![]() |
![]() |
![]() |
---|---|---|---|---|
lnc-SLC39A11-10:45 | no | no | no | no |
Available literature
- Barter (2017), The long non-coding RNA <i>ROCR</i> contributes to SOX9 expression and chondrogenic differentiation of human mesenchymal stem cells., Development
- Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-SLC39A11-5:2 |
3.1 | lnc-SLC39A11-3:2 |
4.0 | SOX9-AS1:33 |
4.1 | SOX9-AS1:33 |
5.0 | SOX9-AS1:33 |
5.1 | lnc-GRB2-56:45 |
5.2 | lnc-SLC39A11-10:45 |