Gene: SNHG16
Basic information
LNCipedia gene ID: SNHG16
Location (hg19): chr17:74553846-74788448
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA_gene
Transcripts: 26
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| SNHG16:1 | chr17:74553846-74561430 | 2439 bp |
| SNHG16:10 | chr17:74553852-74561425 | 2424 bp |
| SNHG16:11 | chr17:74553857-74561663 | 2407 bp |
| SNHG16:12 | chr17:74553857-74561361 | 1964 bp |
| SNHG16:13 | chr17:74553860-74561430 | 3607 bp |
| SNHG16:14 | chr17:74553874-74561361 | 1947 bp |
| SNHG16:15 | chr17:74554545-74559835 | 884 bp |
| SNHG16:2 | chr17:74553846-74561430 | 2435 bp |
| SNHG16:3 | chr17:74553846-74561430 | 2538 bp |
| SNHG16:32 | chr17:74553851-74554542 | 580 bp |
| SNHG16:33 | chr17:74553851-74556515 | 2665 bp |
| SNHG16:34 | chr17:74553851-74557833 | 553 bp |
| SNHG16:35 | chr17:74553851-74559242 | 568 bp |
| SNHG16:36 | chr17:74553851-74561425 | 2425 bp |
| SNHG16:37 | chr17:74553851-74561430 | 3616 bp |
| SNHG16:38 | chr17:74553851-74610089 | 1827 bp |
| SNHG16:39 | chr17:74553851-74788448 | 1190 bp |
| SNHG16:4 | chr17:74553846-74561430 | 2534 bp |
| SNHG16:40 | chr17:74553877-74561361 | 1944 bp |
| SNHG16:41 | chr17:74553888-74559835 | 1541 bp |
| SNHG16:42 | chr17:74554878-74558404 | 3140 bp |
| SNHG16:5 | chr17:74553848-74557833 | 556 bp |
| SNHG16:6 | chr17:74553849-74554542 | 582 bp |
| SNHG16:7 | chr17:74553849-74559370 | 473 bp |
| SNHG16:8 | chr17:74553851-74556515 | 2665 bp |
| SNHG16:9 | chr17:74553851-74559242 | 568 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| SNHG16 | no | no | no | no |
Available literature
- Qi (2015), Down-regulation of ncRAN, a long non-coding RNA, contributes to colorectal cancer cell migration and invasion and predicts poor overall survival for colorectal cancer patients., Mol. Carcinog.
- Hart (2014), MYC regulates the non-coding transcriptome., Oncotarget
- Zhu (2011), ncRAN, a newly identified long noncoding RNA, enhances human bladder tumor growth, invasion, and survival., Urology
- Yu (2009), High expression of ncRAN, a novel non-coding RNA mapped to chromosome 17q25.1, is associated with poor prognosis in neuroblastoma., Int. J. Oncol.