Gene: lnc-SNRPN-8
Basic information
LNCipedia gene ID: lnc-SNRPN-8
Location (hg19): chr15:25223730-25492435
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA_gene
Transcripts: 82
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| lnc-SNRPN-8:100 | chr15:25245452-25265972 | 470 bp |
| lnc-SNRPN-8:101 | chr15:25245461-25247551 | 1108 bp |
| lnc-SNRPN-8:102 | chr15:25247918-25264296 | 241 bp |
| lnc-SNRPN-8:103 | chr15:25247973-25266231 | 722 bp |
| lnc-SNRPN-8:104 | chr15:25259470-25281705 | 17889 bp |
| lnc-SNRPN-8:105 | chr15:25261087-25281638 | 14547 bp |
| lnc-SNRPN-8:106 | chr15:25264182-25299063 | 552 bp |
| lnc-SNRPN-8:107 | chr15:25264972-25281638 | 14289 bp |
| lnc-SNRPN-8:108 | chr15:25277020-25281637 | 4618 bp |
| lnc-SNRPN-8:109 | chr15:25278511-25281637 | 3127 bp |
| lnc-SNRPN-8:110 | chr15:25285552-25285990 | 354 bp |
| lnc-SNRPN-8:111 | chr15:25287065-25287575 | 511 bp |
| lnc-SNRPN-8:112 | chr15:25295779-25367623 | 7844 bp |
| lnc-SNRPN-8:113 | chr15:25295779-25367623 | 7844 bp |
| lnc-SNRPN-8:114 | chr15:25296236-25301712 | 626 bp |
| lnc-SNRPN-8:115 | chr15:25299014-25360804 | 4686 bp |
| lnc-SNRPN-8:116 | chr15:25299860-25300392 | 430 bp |
| lnc-SNRPN-8:117 | chr15:25301630-25307235 | 789 bp |
| lnc-SNRPN-8:118 | chr15:25304604-25367621 | 7846 bp |
| lnc-SNRPN-8:119 | chr15:25304604-25360803 | 4429 bp |
| lnc-SNRPN-8:120 | chr15:25309918-25319198 | 638 bp |
| lnc-SNRPN-8:121 | chr15:25322013-25330407 | 713 bp |
| lnc-SNRPN-8:122 | chr15:25322013-25328606 | 694 bp |
| lnc-SNRPN-8:123 | chr15:25326238-25359068 | 8993 bp |
| lnc-SNRPN-8:124 | chr15:25326301-25359074 | 8842 bp |
| lnc-SNRPN-8:125 | chr15:25328543-25367621 | 6671 bp |
| lnc-SNRPN-8:126 | chr15:25328605-25365500 | 4478 bp |
| lnc-SNRPN-8:127 | chr15:25330337-25355599 | 2286 bp |
| lnc-SNRPN-8:128 | chr15:25330418-25355602 | 2208 bp |
| lnc-SNRPN-8:129 | chr15:25332808-25334043 | 1236 bp |
| lnc-SNRPN-8:130 | chr15:25340608-25364501 | 2892 bp |
| lnc-SNRPN-8:131 | chr15:25343871-25344404 | 218 bp |
| lnc-SNRPN-8:132 | chr15:25354134-25354551 | 418 bp |
| lnc-SNRPN-8:133 | chr15:25354144-25364518 | 1490 bp |
| lnc-SNRPN-8:134 | chr15:25354150-25364575 | 1538 bp |
| lnc-SNRPN-8:135 | chr15:25354699-25364507 | 1166 bp |
| lnc-SNRPN-8:136 | chr15:25354699-25357076 | 329 bp |
| lnc-SNRPN-8:137 | chr15:25355584-25361586 | 690 bp |
| lnc-SNRPN-8:138 | chr15:25355630-25362629 | 615 bp |
| lnc-SNRPN-8:139 | chr15:25360162-25364575 | 1224 bp |
| lnc-SNRPN-8:140 | chr15:25360388-25365051 | 1477 bp |
| lnc-SNRPN-8:141 | chr15:25361692-25367621 | 4496 bp |
| lnc-SNRPN-8:142 | chr15:25361692-25367623 | 4498 bp |
| lnc-SNRPN-8:143 | chr15:25361692-25365198 | 2073 bp |
| lnc-SNRPN-8:144 | chr15:25362275-25366068 | 2357 bp |
| lnc-SNRPN-8:145 | chr15:25362557-25420017 | 631 bp |
| lnc-SNRPN-8:146 | chr15:25362619-25418143 | 513 bp |
| lnc-SNRPN-8:147 | chr15:25364212-25420017 | 752 bp |
| lnc-SNRPN-8:148 | chr15:25418126-25427198 | 621 bp |
| lnc-SNRPN-8:149 | chr15:25418126-25427252 | 662 bp |
| lnc-SNRPN-8:150 | chr15:25418126-25427198 | 608 bp |
| lnc-SNRPN-8:151 | chr15:25425461-25427855 | 779 bp |
| lnc-SNRPN-8:152 | chr15:25425461-25427855 | 812 bp |
| lnc-SNRPN-8:153 | chr15:25426957-25430721 | 615 bp |
| lnc-SNRPN-8:154 | chr15:25426990-25467432 | 3166 bp |
| lnc-SNRPN-8:155 | chr15:25427859-25431154 | 223 bp |
| lnc-SNRPN-8:156 | chr15:25427872-25431154 | 345 bp |
| lnc-SNRPN-8:157 | chr15:25430604-25434472 | 444 bp |
| lnc-SNRPN-8:158 | chr15:25434450-25438636 | 610 bp |
| lnc-SNRPN-8:159 | chr15:25436387-25442649 | 644 bp |
| lnc-SNRPN-8:160 | chr15:25438460-25442649 | 544 bp |
| lnc-SNRPN-8:161 | chr15:25442575-25459165 | 2097 bp |
| lnc-SNRPN-8:162 | chr15:25442575-25459165 | 1189 bp |
| lnc-SNRPN-8:163 | chr15:25451227-25458676 | 677 bp |
| lnc-SNRPN-8:164 | chr15:25456839-25457180 | 342 bp |
| lnc-SNRPN-8:165 | chr15:25458606-25467437 | 609 bp |
| lnc-SNRPN-8:166 | chr15:25463499-25492435 | 2896 bp |
| lnc-SNRPN-8:167 | chr15:25489083-25489534 | 302 bp |
| lnc-SNRPN-8:25 | chr15:25286836-25365579 | 13074 bp |
| lnc-SNRPN-8:87 | chr15:25223730-25228933 | 3210 bp |
| lnc-SNRPN-8:88 | chr15:25224704-25266501 | 2696 bp |
| lnc-SNRPN-8:89 | chr15:25224704-25266823 | 3018 bp |
| lnc-SNRPN-8:90 | chr15:25224704-25267813 | 4008 bp |
| lnc-SNRPN-8:91 | chr15:25226922-25266498 | 2469 bp |
| lnc-SNRPN-8:92 | chr15:25227141-25247977 | 550 bp |
| lnc-SNRPN-8:93 | chr15:25227141-25228937 | 1797 bp |
| lnc-SNRPN-8:94 | chr15:25241370-25365009 | 21686 bp |
| lnc-SNRPN-8:95 | chr15:25243101-25265957 | 1677 bp |
| lnc-SNRPN-8:96 | chr15:25243101-25244291 | 708 bp |
| lnc-SNRPN-8:97 | chr15:25243337-25271759 | 7203 bp |
| lnc-SNRPN-8:98 | chr15:25243571-25246878 | 676 bp |
| lnc-SNRPN-8:99 | chr15:25245389-25271779 | 6860 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-SNRPN-8 | no | no | no | no |
Available literature
- Qi (2017), Long non-coding RNA SNHG14 promotes microglia activation by regulating miR-145-5p/PLA2G4A in cerebral infarction., Neuroscience
- Kanduri (2016), Long noncoding RNAs: Lessons from genomic imprinting., Biochim. Biophys. Acta
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Zhao (2015), Identification of cancer-related lncRNAs through integrating genome, regulome and transcriptome features., Mol Biosyst
- Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther
- Murrell (2014), Cross-talk between imprinted loci in Prader-Willi syndrome., Nat. Genet.
- Stelzer (2014), The noncoding RNA IPW regulates the imprinted DLK1-DIO3 locus in an induced pluripotent stem cell model of Prader-Willi syndrome., Nat. Genet.
- Powell (2013), A Prader-Willi locus lncRNA cloud modulates diurnal genes and energy expenditure., Hum. Mol. Genet.
- Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome Res.
- Vitali (2010), Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays., J. Cell. Sci.
- Landers (2004), Regulation of the large (approximately 1000 kb) imprinted murine Ube3a antisense transcript by alternative exons upstream of Snurf/Snrpn., Nucleic Acids Res.
- Runte (2001), The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A., Hum. Mol. Genet.
- Wevrick (1997), An imprinted mouse transcript homologous to the human imprinted in Prader-Willi syndrome (IPW) gene., Hum. Mol. Genet.
- Rachmilewitz (1996), Characterization of the imprinted IPW gene: allelic expression in normal and tumorigenic human tissues., Oncogene
- Wevrick (1994), Identification of a novel paternally expressed gene in the Prader-Willi syndrome region., Hum. Mol. Genet.