Gene: lnc-FOXO1-2
Basic information
HGNC Gene Symbol:
LINC00548
?
HGNC Full Gene Name:
long intergenic non-protein coding RNA 548
Location (hg19): chr13:40653240-41109944
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA_gene
Transcripts: 34
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| lnc-FOXO1-2:1 | chr13:40918094-40924440 | 444 bp |
| lnc-FOXO1-2:10 | chr13:41025131-41055143 | 702 bp |
| lnc-FOXO1-2:11 | chr13:41025073-41044386 | 1973 bp |
| lnc-FOXO1-2:12 | chr13:41032671-41040785 | 402 bp |
| lnc-FOXO1-2:14 | chr13:41052903-41055209 | 905 bp |
| lnc-FOXO1-2:15 | chr13:40870249-41055165 | 1943 bp |
| lnc-FOXO1-2:16 | chr13:41044224-41055162 | 528 bp |
| lnc-FOXO1-2:17 | chr13:40921269-41034488 | 3241 bp |
| lnc-FOXO1-2:18 | chr13:40888932-41013924 | 1297 bp |
| lnc-FOXO1-2:19 | chr13:40858914-40977903 | 1501 bp |
| lnc-FOXO1-2:2 | chr13:40768737-40918250 | 253 bp |
| lnc-FOXO1-2:20 | chr13:40653240-40951443 | 4220 bp |
| lnc-FOXO1-2:21 | chr13:40653240-40951443 | 4140 bp |
| lnc-FOXO1-2:22 | chr13:40653240-40951443 | 4389 bp |
| lnc-FOXO1-2:23 | chr13:40653240-40951443 | 4123 bp |
| lnc-FOXO1-2:24 | chr13:40916321-40951443 | 2472 bp |
| lnc-FOXO1-2:25 | chr13:40772211-40951398 | 1974 bp |
| lnc-FOXO1-2:26 | chr13:40923686-40924612 | 927 bp |
| lnc-FOXO1-2:27 | chr13:40656199-40924612 | 1040 bp |
| lnc-FOXO1-2:28 | chr13:40734839-40924612 | 1612 bp |
| lnc-FOXO1-2:29 | chr13:40895233-40924612 | 5351 bp |
| lnc-FOXO1-2:3 | chr13:40768646-40794639 | 2551 bp |
| lnc-FOXO1-2:30 | chr13:40910085-40924612 | 2079 bp |
| lnc-FOXO1-2:31 | chr13:40777754-40924450 | 1456 bp |
| lnc-FOXO1-2:32 | chr13:40653243-40847646 | 3541 bp |
| lnc-FOXO1-2:33 | chr13:40655961-40760979 | 1148 bp |
| lnc-FOXO1-2:34 | chr13:40921269-41055143 | 3974 bp |
| lnc-FOXO1-2:35 | chr13:40921269-41055143 | 3834 bp |
| lnc-FOXO1-2:4 | chr13:41025071-41055143 | 2088 bp |
| lnc-FOXO1-2:5 | chr13:40921271-41055143 | 3832 bp |
| lnc-FOXO1-2:6 | chr13:40921271-41055143 | 3970 bp |
| lnc-FOXO1-2:7 | chr13:41025068-41048232 | 3362 bp |
| lnc-FOXO1-2:8 | chr13:40914674-40921199 | 1774 bp |
| lnc-FOXO1-2:9 | chr13:41033040-41109944 | 483 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-FOXO1-2 | no | no | no | no |
Available literature
- Jeong (2016), Long noncoding RNA linc00598 regulates CCND2 transcription and modulates the G1 checkpoint., Sci Rep
- Qiao (2003), Identification of a novel fusion gene, TTL, fused to ETV6 in acute lymphoblastic leukemia with t(12;13)(p13;q14), and its implication in leukemogenesis., Leukemia